These Homemade Whole Wheat Bagels are one of the most popular recipes on my site. Have no fear, they’re much easier to make than you’d expect! The recipe makes 8 bagels, but they freeze and reheat well, so you can eat a few now and save the rest for later.
There are some foods I believe are worth buying rather than making yourself. If you asked me two years ago, I would have said bagels were one of them.
However, over the past year, I’ve been trying to master the art of whole-grain bread baking. Baking yeast breads (not quick-cooking) is very time consuming, so I don’t do it all that often, but when I make the time for it, the results are always marvelous.
These whole wheat bagels did not take nearly as long as some breads I’ve made in the past. They really only require one hour of “hands-on” time. You can handle that, can’t you?
I first attempted making bagels one time about a year ago, but this recipe turned out much, much better. I think having completed the process once before (errr…learning from my mistakes) really helped. Additionally, this time around I used White Whole Wheat flour, which makes for a lighter and less dense bagel than regular Whole Wheat flour.
If you make the dough the night before, like I did, all you have to do it pull it out of the fridge the next morning and allow it to come to room temperature (about 30 minutes). Before you know it, you will have freshly baked bagels within the hour!
You can top your bagels with whatever you like. I opted for sesame seeds and rolled oats. Next time I am going to take a stab at Cinnamon Raisin bagels – my childhood favorite.
After baking, these bagels are crunchy on the outside and soft on the inside. They are the perfect size for my liking (slightly smaller than the typical bakery bagel). We ate these as soon as I pulled them out of the oven alongside scrambled eggs. It was the perfect protein and whole-grain packed breakfast to keep us going until lunch.
If you are a beginner bread-maker, I urge you to try this recipe. It is simple, involves very little kneading, and doesn’t require the patience of a saint.
Go, get to it! The carbs are screaming your name!

Making 100% Whole Wheat Bagels at home is easier than you think, and you'll love the final product. The recipe makes 8 bagels, but they freeze and reheat well, so you can eat a few now and save the rest for later.
- 1 package active dry yeast (about 1 TBSP)
- 1 1/3 cups 11 oz warm water (not hot), divided
- 3 Tablespoons sugar, divided
- 3.5 cups White Whole Wheat Flour (16 oz.)
- 2 teaspoons salt
- 1 whole egg + 1 teaspoon water, beaten
- Sesame Seeds
- Rolled Oats
- Poppy Seeds
- Minced Garlic
- Asiago Cheese
- Sunflower Seeds
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In a small bowl combine the yeast with 1/4 cup of the warm water and 1 teaspoon of the sugar. Stir to combine. Allow to sit for 10 minutes until the yeast mixture becomes foamy (if it does not foam then something is wrong with your yeast).
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In a large bowl combine the white whole wheat flour, yeast mixture, remaining water, remaining sugar, and salt. Knead for 10 minutes by hand or 5 minutes in a stand mixer. If the dough seems too dry, add an additional Tablespoon of water. Place the dough in a large clean and lightly greased mixing bowl. Cover with a kitchen towel and allow to rise in a warm place for 2 hours*. The dough should approximately double in size.
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Place the dough on a clean counter space or large cutting board. Divide the dough into 8 equal sized pieced. Roll each piece gently into a ball. Using your index finger, poke a hole in the middle of each ball. Gently pick up the dough and swirl it around your index finger a few times to make the hole a bit larger. Repeat with all of the balls of dough. Allow to rest for 15 minutes.
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Preheat your oven to 450 degrees. Line a baking sheet with parchment paper. Grease the parchment paper (to prevent any possible sticking). While the dough is resting, bring a large pot of water to a low boil. Add 1 Tablespoon of sugar to the water. Drop half of the bagels into the pot. If they sink, allow them to float to the top (you may need to use a spoon to push them to the top). Once floating, boil the bagels for 1 minute and then flip and boil for an additional minute on the other side. Use a slotted spoon to remove the bagels. Place them on the baking sheet. Repeat until all bagels have been boiled.
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If you are using toppings for your bagels, liberally coat the tops of each bagel with the egg wash. Sprinkle the toppings onto the bagels. Bake for 15 minutes, then rotate the pan 180 degrees and bake for an additional 10 minutes. The bagels should be golden brown on top. Allow to bake a few additional minutes longer for crispier bagels.
*Alternatively, you can put the dough in the fridge overnight for up to 12 hours and allow it to rise in the fridge. If you choose this option, make sure to allow the dough to come to room temperature before baking in the morning. Be cautious because the longer it sits, it will become sour (think sourdough).
The Cookie Writer
These look awesome! I have made my own bread and should really expand to bagels, English muffins, etc. Ever since making homemade tortillas, I cannot go back to store-bought!
Rachel (littlechefbigappetite)
I hope you make them and love them as much as I did!
RealCheapFood
Thanks! I’m glad I found this recipe, along with the pictures. I’ve started experimenting with making bagles, and this recipe — I can see already — is going to help me an awful lot!
Rachel (littlechefbigappetite)
I am so glad to hear it! Let me know how they turn out for you!
Bonbon
I have not tried this recipe but am really lookimg forward to doing so. One question: if I were to add blueberries (fresh or dried), how and when would I do that, and how much?
Rachel (littlechefbigappetite)
I would recommend using dried (fresh could get very messy!) and adding them in at Step 2 right before kneading.
Sarah S
Hey beautiful! I just made these step by step and they turned out incredible! I see what you mean about whole wheat flour by the bagel being dense, because that is what I used. I like mine a little dense! But next time round I will be sure to use white whole wheat. I topped mine with rosemary, garlic, debydrated onion and sesame seeds. Never have been more satisfied in my life. I prasie you ma’lady.
Rachel (littlechefbigappetite)
Sarah, I am SO happy to hear these turned out well! Your toppings sound DELISH – I’m going to try those next time. 🙂 XOX
Maggie
Very nice . I just made these todAy. Big son and grandchildren loved them. Will be making them again.
Rachel (littlechefbigappetite)
Hi Maggie, I am so glad your family loved them! It’s one of my favorite recipes!
Becky
I just made these. I used whole wheat flour and honey instead of sugar. I added cinnamon and chopped walnuts in the dough. They are wonderful – not too heavy at all. This recipe is definitely a keeper!
Rachel (littlechefbigappetite)
Becky, I am SO glad to hear that! Cinnamon + walnuts sounds AMAZING – I am definitely trying that next time.
Mimi
Wow these bagels taste so great!! Thank you so much for sharing the recipe!!
Rachel (littlechefbigappetite)
Yay!! I am so glad you tried them and liked them!
Michi
Never made bagels before, but had a general idea. This is sooooo easy and we devoured the entire batch within hours. I may never buy bagels again. I’m guessing the recipe can easily be doubled? Thanks.
Rachel (littlechefbigappetite)
YAY! I am so glad you loved the recipe, Michi! Thank you for commenting and letting me know. Yes, absolutely it can be doubled. I make extras and freeze them 🙂
James
Thanks for this recipe! Looks great. I am about to head to the supermarket to pick up the ingredients now. My GF is at work and I want to make them before she gets home lol.
Wish me luck 🙂
Rachel (littlechefbigappetite)
James, I am so impressed! Definitely let me know how they turn out!
James
Hey Rachel, so I am back 🙂
I made a few tweaks.
1. I forgot to pick up whole wheat flour so I went with bread flour instead.
2. I added a teaspoon of vanilla and 1/2 teaspoon almond spice to the water for flavoring.
Now they are done. Am nervous to taste it lol. SO I have some pics for you. I can’t post on your blog so hopefully you’ll allow this link. To my bagels 🙂
https://www.flickr.com/photos/140735534@N07/shares/s80S19
Thanks again for the recipe.
…..
James
PS. I hope my GF likes them, she should be home soon. So I’ll just wait for her to taste it first haha.
Rachel (littlechefbigappetite)
They look awesome!! Thanks for stopping back to tell me how it went. I’ve never made them with bread flour, so once you taste them make sure to let me know how they were!
James
They are delicious!. I forgot to let you know that I also added some raisons and a bit of cinnamon powder as well.
I toasted one and then added some cheese. YUMMY. I don’t know if I will be buying bagels again lol.
Now I make them myself. 🙂
Thanks again for the recipe.
….
James
Rachel (littlechefbigappetite)
Yay! You made my day! I’ll have to try them with cinnamon and raisins!
Phoenix
I just made your recipe. This is the first time I’ve ever made bagels. I only had to let them rise an hour instead of two—must be warm in my house.
My mother in law loved them. I actually might have to adjust the temp further. I cooked at 425 for the 25 mins and they got darker than I’d like.
They also got a little shrivelled, did I boil too long? Not enough?
Anyway, will definitely use this recipe again. Thank you!!
Rachel (littlechefbigappetite)
Thank you so much for trying my recipe! I am so glad your MIL loved them. So strange that yours shriveled, I’ve never had that happen. Also, is it possible that your oven may run hot? Mine doesn’t get hot enough, so I use an oven thermometer that I bought on Amazon. Maybe next time just aim for 20 min. I am sure you could continue to tweak it until it’s perfect to your liking! Thanks for stopping by. – Rachel
Mili
Awesome recipe. I am from us but currently live in India, no one has heard of bagels in all of india. And i am so glad i found your page. I have bookmarked this recipe and everytime i have a craving i make it my self.
Rachel (littlechefbigappetite)
That makes me so happy to hear! So glad that you can fulfill your bagel craving while living in India.